MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus saprophyticus
19428wB1_WM06
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 40
bases: 2,926,943 bps
CDS: 2,726
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,795
Total number of protein coding genes annotated/found:
2,726
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5041|JADGLJ010000001.1
SEQF5041_00695
Genome Viewer
NA
AA
3015/1005
600140-597126
hypothetical protein
SEQF5041|JADGLJ010000001.1
SEQF5041_00694
Genome Viewer
NA
AA
1521/507
596908-595388
Long-chain-aldehyde dehydrogenase
SEQF5041|JADGLJ010000001.1
SEQF5041_00693
Genome Viewer
NA
AA
327/109
595290-594964
hypothetical protein
SEQF5041|JADGLJ010000001.1
SEQF5041_00692
Genome Viewer
NA
AA
342/114
594779-594438
hypothetical protein
SEQF5041|JADGLJ010000001.1
SEQF5041_00691
Genome Viewer
NA
AA
453/151
593919-594371
hypothetical protein
SEQF5041|JADGLJ010000001.1
SEQF5041_00690
Genome Viewer
NA
AA
804/268
593110-593913
hypothetical protein
SEQF5041|JADGLJ010000001.1
SEQF5041_00689
Genome Viewer
NA
AA
981/327
592698-591718
putative tRNA-dihydrouridine synthase
SEQF5041|JADGLJ010000001.1
SEQF5041_00688
Genome Viewer
NA
AA
1191/397
590470-591660
Inner membrane transport protein YnfM
SEQF5041|JADGLJ010000001.1
SEQF5041_00687
Genome Viewer
NA
AA
888/296
590357-589470
HTH-type transcriptional regulator GltC
SEQF5041|JADGLJ010000001.1
SEQF5041_00686
Genome Viewer
NA
AA
1053/351
589340-588288
Glycyl-glycine endopeptidase LytM
SEQF5041|JADGLJ010000001.1
SEQF5041_00685
Genome Viewer
NA
AA
744/248
588112-587369
Glycerophosphodiester phosphodiesterase%2C cytoplasmic
SEQF5041|JADGLJ010000001.1
SEQF5041_00684
Genome Viewer
NA
AA
429/143
587141-586713
hypothetical protein
SEQF5041|JADGLJ010000001.1
SEQF5041_00683
Genome Viewer
NA
AA
942/314
586502-585561
hypothetical protein
SEQF5041|JADGLJ010000001.1
SEQF5041_00682
Genome Viewer
NA
AA
456/152
585233-584778
hypothetical protein
SEQF5041|JADGLJ010000001.1
SEQF5041_00681
Genome Viewer
NA
AA
1650/550
584361-582712
Indole-3-pyruvate decarboxylase
SEQF5041|JADGLJ010000001.1
SEQF5041_00680
Genome Viewer
NA
AA
567/189
582436-581870
hypothetical protein
SEQF5041|JADGLJ010000001.1
SEQF5041_00679
Genome Viewer
NA
AA
1131/377
581855-580725
Flavin-dependent monooxygenase
SEQF5041|JADGLJ010000001.1
SEQF5041_00678
Genome Viewer
NA
AA
1230/410
579383-580612
putative oxidoreductase
SEQF5041|JADGLJ010000001.1
SEQF5041_00677
Genome Viewer
NA
AA
1005/335
579123-578119
hypothetical protein
SEQF5041|JADGLJ010000001.1
SEQF5041_00676
Genome Viewer
NA
AA
333/111
578098-577766
Glycine cleavage system H-like protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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